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JVM hangs beyond recovery

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syrenity
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Joined: 2008-07-02
Points: 0

Hi.

I hit a possible deadlock in JVM, which causes my JNI application to hang.

It happens usually on start-up, and the JVM just stuck, jstack and other tools are not working and the only option is to get a threads dump via GDB.

Attached below is a sample of such dump.
Can anyone tell if this is a known issue, and there is any workaround?

Thanks in advance!

http://pastie.org/923725

0x0000003c71607955 in pthread_join () from /lib64/libpthread.so.0
40 Thread 0x41234940 (LWP 20847) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
39 Thread 0x40640940 (LWP 20849) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
38 Thread 0x41345940 (LWP 20850) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
37 Thread 0x41446940 (LWP 20851) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
36 Thread 0x41ab2940 (LWP 20852) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
35 Thread 0x42055940 (LWP 20853) 0x0000003c7160af70 in pthread_cond_timedwait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
34 Thread 0x41970940 (LWP 20854) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
33 Thread 0x41bb3940 (LWP 20855) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
32 Thread 0x41cb4940 (LWP 20856) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
31 Thread 0x403e2940 (LWP 20857) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
30 Thread 0x40ee5940 (LWP 20858) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
29 Thread 0x40fe6940 (LWP 20859) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
28 Thread 0x416ab940 (LWP 20860) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
27 Thread 0x417ac940 (LWP 20861) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
26 Thread 0x41db5940 (LWP 20862) 0x0000003c7160af70 in pthread_cond_timedwait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
25 Thread 0x410e9940 (LWP 20863) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
24 Thread 0x41eb6940 (LWP 20865) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
23 Thread 0x42156940 (LWP 20866) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
22 Thread 0x42257940 (LWP 20867) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
21 Thread 0x42358940 (LWP 20868) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
20 Thread 0x42459940 (LWP 20869) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
19 Thread 0x41547940 (LWP 20870) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
18 Thread 0x4255a940 (LWP 20871) 0x0000003c7160d95b in accept ()
from /lib64/libpthread.so.0
17 Thread 0x4265b940 (LWP 20872) 0x0000003c7160d95b in accept ()
from /lib64/libpthread.so.0
16 Thread 0x40cc0940 (LWP 20873) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
15 Thread 0x4275c940 (LWP 20874) 0x0000003c70ad4018 in epoll_wait ()
from /lib64/libc.so.6
14 Thread 0x4285d940 (LWP 20875) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
13 Thread 0x4295e940 (LWP 20876) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
12 Thread 0x42b60940 (LWP 20878) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
11 Thread 0x42c61940 (LWP 20879) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
10 Thread 0x42d62940 (LWP 20880) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
9 Thread 0x42e63940 (LWP 20881) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
8 Thread 0x42f64940 (LWP 20882) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
7 Thread 0x43065940 (LWP 20886) 0x0000003c7160d2e4 in __lll_lock_wait ()
from /lib64/libpthread.so.0
6 Thread 0x43166940 (LWP 20887) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
5 Thread 0x43267940 (LWP 20888) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
4 Thread 0x43368940 (LWP 20889) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
3 Thread 0x43469940 (LWP 20890) 0x0000003c7160ad09 in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
2 Thread 0x44a19940 (LWP 20891) 0x0000003c7160af70 in pthread_cond_timedwait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
* 1 Thread 0x2ba36feee5c0 (LWP 20843) 0x0000003c71607955 in pthread_join ()
from /lib64/libpthread.so.0